Insertion junction: CLIP2.037896_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.037896
Chromosome:chromosome 11
Location:1251462
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467695 (1 of 39) IPR009003 - Peptidase S1, PA clan intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAGTCACATAGACCAGTACAGGCATCAAGCACGTTGGAAGGTGTGCAG
Internal bar code:ATCGGCCATTTCCTGCATGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2211
LEAP-Seq percent confirming:89.2308
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTTGTCAGTGCACCTTG
Suggested primer 2:CCATGAAGGCAGCCACACTA