Insertion junction: CLIP2.037900_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.037900
Chromosome:chromosome 6
Location:7989625
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g304600 (1 of 1) PTHR22778:SF18 - RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 8, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAGTGTGTGGGCGTGGGTGCAAGGAGTAGGATGAATTAGGTGGTCGCAG
Internal bar code:GATGGGGCGTTCGATGCGTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1169
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGTCCTGGTAGCATCATC
Suggested primer 2:ACTGACTTCGTCCGACACAC