Insertion junction: CLIP2.037900_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.037900
Chromosome:chromosome 6
Location:7989625
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g304600 (1 of 1) PTHR22778:SF18 - RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 8, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGACCCAGGCGCCTGGGGCAACTACGCGGACCGGGACGAGGTGGGGCCGG
Internal bar code:TTACTGGTCACTCGTAAACCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1802
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGACTTCGTCCGACACAC
Suggested primer 2:CCCGTCCTGGTAGCATCATC