Insertion junction: CLIP2.037911_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.037911
Chromosome:chromosome 12
Location:4577452
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g521650 (1 of 3) PTHR22753:SF1 - TRANSMEMBRANE PROTEIN 68 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCCCCCTCCCCCTCCGCCTCCCCCCCGCCTGCAGCTGCGTGGACCGG
Internal bar code:CCAAGCCACGAGCGTGCCCCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:509
LEAP-Seq percent confirming:57.8947
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCGAACATTCTCAGCCCC
Suggested primer 2:CGTGCCAAACTGGTGTCATG