Insertion junction: CLIP2.037937_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.037937
Chromosome:chromosome 3
Location:4401219
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g175050 TRP13 Transient receptor potential ion channel protein; (1 of 6) PTHR10117 - TRANSIENT RECEPTOR POTENTIAL CHANNEL CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGGACAATCGCATGGTGTTCAAGCTGTTTTGCAACGCCGGCTTTGTGG
Internal bar code:CGTTGTTCGGGTATAGCGTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:476
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ACCATGGACAGCACGTACAG
Suggested primer 2:CCGGCGCAGTTAGGTATGAT