Insertion junction: CLIP2.037939_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.037939
Chromosome:chromosome 7
Location:548055
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g316200 (1 of 726) IPR011009 - Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTCCTTATCCCCACCTAGCACCAAAGCGCTGGCGTGAAGTAGATTTA
Internal bar code:TGAATTCGCATGCAAGCCCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2661
LEAP-Seq percent confirming:52.4752
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:48
LEAP-Seq n unique pos:101

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGCCCATGCTATCACGAT
Suggested primer 2:GATGACGTCACGCGAATTGG