Insertion junction: CLIP2.037942_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.037942
Chromosome:chromosome 2
Location:7696063
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g147150 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTGCTGACCAGGCTGCTGCTGTTGCCCCGGCTGCAGCGGCCTCCCCTC
Internal bar code:TATCTGCGTTATATGGCCTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1304
LEAP-Seq percent confirming:26.9231
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAAGGACGACTCAGCAGC
Suggested primer 2:CTGTAGCAGAGTCAGCGAGG