Insertion junction: CLIP2.037946_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.037946
Chromosome:chromosome 12
Location:1862813
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g512200 MFT26 Major facilitator superfamily transporter; (1 of 1) PTHR23504//PTHR23504:SF15 - FAMILY NOT NAMED // PROTEIN ZINC INDUCED FACILITATOR 1-RELATED 3'UTR
Cre12.g512250 RRP6b,RRP7 3'-5' endonuclease; (1 of 1) K12591 - exosome complex exonuclease RRP6 (RRP6, EXOSC10) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGGCCCGTTGAGAGGGCCCGGCCGGCTCGCCATCTTAAGCGAGGACAG
Internal bar code:CGGCCGAGTGATTCATCAGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1146
LEAP-Seq percent confirming:65.3846
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCGGAACTGGTGTACTGT
Suggested primer 2:CCAGTCAGGAATGGGACCAC