Insertion junction: CLIP2.037967_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.037967
Chromosome:chromosome 16
Location:4599446
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g671000 NDA5 Type-II NADH dehydrogenase; (1 of 1) K17872 - NADH:ubiquinone reductase (non-electrogenic) (ndh2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCCTGGGCACCTGGCGCAACCTCTCAACCCCTGCGGCGCCCGCAATAC
Internal bar code:CGAGCTCATAAGGAATTCCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:268
LEAP-Seq percent confirming:41.0714
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAAGTGAAGTGCCGACGT
Suggested primer 2:CCCACCCATCCAGCATCTTT