Insertion junction: CLIP2.037968_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.037968
Chromosome:chromosome 17
Location:361138
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g698365 PF7,CCDC40,FAP172 Flagellar Associated Protein 172 5'UTR
Cre17.g698400 LCI31 Low-CO2-inducible protein 31 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCATAGGGCGGAACCGCGGTCGACCCCGGCTCAGCGCCTTCACCAACG
Internal bar code:TTCTCTCTAAAGGCACTGACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2956
LEAP-Seq percent confirming:98.0769
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCCGGAGACATATTCGAC
Suggested primer 2:ACGAAGCCTGACCAAATCGT