Insertion junction: CLIP2.037969_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.037969
Chromosome:chromosome 3
Location:1154828
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g149150 (1 of 1) IPR000104//IPR013022 - Antifreeze protein, type I // Xylose isomerase-like, TIM barrel domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCACATTGCACACGAGTCTGGTGTGTGTAGGTCCATGGATGCAAGAA
Internal bar code:ACAACCGGCGGATGAATCAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:4542
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCTCTGTTTCAGTCAGCA
Suggested primer 2:AGTCGCTGAAACTGGAGGTG