Insertion junction: CLIP2.037977_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.037977
Chromosome:chromosome 10
Location:388991
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g420512 (1 of 13) 3.1.13.4 - Poly(A)-specific ribonuclease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCGGCGGCGCCGTACCTCCGTACACCAGGCCAACTGCCACCTGGCGG
Internal bar code:GTATAGGTTATACTAGTTGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2243
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CCCATAACCCTGTCCAGCAG
Suggested primer 2:GCAGGAGTAGCAGCGACTAG