Insertion junction: CLIP2.037983_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.037983
Chromosome:chromosome 12
Location:5638313
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00112996

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGCAGCTTTTGAGTCGTCCGTATGACTGCTGATTGCGGGCGAATTAG
Internal bar code:AGACGGGCCGTCGAAGAAAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:686
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCCCCTCCACGTAAACAC
Suggested primer 2:TTCGGTGCCAAGTAGTGTCC