Insertion junction: CLIP2.038001_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.038001
Chromosome:chromosome 3
Location:6426892
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g192950 (1 of 4) 2.7.11.13 - Protein kinase C / PKC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTGGCGGCCGCCGGGTAGGTCTTCAACAGGTGCGCCTCCGTGGGGGTC
Internal bar code:CACACAGCGATACATGTTTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1904
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CAATGACATCTCGGCCGGTA
Suggested primer 2:AGGGAATGTGCTTGGGGATG