Insertion junction: CLIP2.038003_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.038003
Chromosome:chromosome 4
Location:3089642
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g225500 CSA6 (1 of 1) PF15066 - Cancer-associated gene protein 1 family (CAGE1); conserved protein of unknown function CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGCGGGTGCCTCGCCTGCAGCGCTGCCAGCCACACCGAATACTGCATG
Internal bar code:CCGGTCATCTTTTACCGGAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1491
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGACGGCCTTGAGAACTT
Suggested primer 2:TCCCCATTCAGGTGTGATGC