Insertion junction: CLIP2.038003_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.038003
Chromosome:chromosome 4
Location:3089645
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g225500 CSA6 (1 of 1) PF15066 - Cancer-associated gene protein 1 family (CAGE1); conserved protein of unknown function CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGAGCAGCACCACCTGGACGCCCCCGCCATCCAGCTGCTGCACAAGGGG
Internal bar code:CCGGTCATCTTTTACCGGAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3125
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCCATTCAGGTGTGATGC
Suggested primer 2:CTCGACGGCCTTGAGAACTT