Insertion junction: CLIP2.038007_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.038007
Chromosome:chromosome 17
Location:3649817
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGAGGAGTGTGTCAGTAGCGTCAATGAGAGAAGAGAACCTCAACAAAC
Internal bar code:TTCACTTTTTACTTGTAAACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3094
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGTACCGTATCGCGCTTA
Suggested primer 2:TGTTCAACCGCCTCTGAGTC