Insertion junction: CLIP2.038007_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.038007
Chromosome:chromosome 17
Location:3649821
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATGGGGAACCCACATCGGGCCCCGGGCACCGCAGGGCCCGCACACCAG
Internal bar code:TTCACTTTTTACTTGTAAACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2651
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTCAACCGCCTCTGAGTC
Suggested primer 2:GGTGTACCGTATCGCGCTTA