Insertion junction: CLIP2.038008_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.038008
Chromosome:chromosome 2
Location:7036552
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389838 (1 of 1) IPR000504//IPR002750//IPR012677 - RNA recognition motif domain // CobE/GbiG C-terminal domain // Nucleotide-binding alpha-beta plait domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAATCTGCTGCCGACAACAACCGGCGCGCAGCTCGAGCGCCTGTTTGC
Internal bar code:TAACGCAGGTCATTACTTTACC

Confirmation - LEAP-Seq

LEAP-Seq distance:2678
LEAP-Seq percent confirming:91.1765
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAGCTGTGGTGAAACACG
Suggested primer 2:GTTTGACGACGGCGATGATG