Insertion junction: CLIP2.038013_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038013
Chromosome:chromosome 3
Location:5634375
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g186100 (1 of 13) IPR005123//IPR006620 - Oxoglutarate/iron-dependent dioxygenase // Prolyl 4-hydroxylase, alpha subunit intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGTGTGTCTTCCGCTGCCACTGGGGCGGCACATGGCCGCCGTTGGCAT
Internal bar code:GGTTTTTACGTGTTTGGCGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:6147
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:120
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:120

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCAGTTCGTGTGCCATAC
Suggested primer 2:CGGCATCGTGGATATGGTGA