Insertion junction: CLIP2.038015_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038015
Chromosome:chromosome 14
Location:1524410
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g617800 (1 of 3) PTHR12385:SF44 - PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATACCTTCATGCGCACCCATTGCTCACCTGCCCACCTGACACCTCTCG
Internal bar code:GTTGTATGGGTGCACTGTGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4393
LEAP-Seq percent confirming:96.1039
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:ATCACGCAGTTGAGGATGCA
Suggested primer 2:TTCTTGCTGCGCCTTCTACA