Insertion junction: CLIP2.038031_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.038031
Chromosome:chromosome 4
Location:1692338
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g212400 UBC15 (1 of 10) IPR001876 - Zinc finger, RanBP2-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAGGGGCGCTTCGTAAACGCGAGACGCGGGACTCGCCCTCGGGTTAGA
Internal bar code:GGAGGGCCACACTGGATGCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1015
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GATCACTCTGATGGAGGGCG
Suggested primer 2:AGCTGGGTCCTCTTCGATCT