Insertion junction: CLIP2.038031_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038031
Chromosome:chromosome 4
Location:1692358
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g212400 UBC15 (1 of 10) IPR001876 - Zinc finger, RanBP2-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCAAAGCGCCACCATGCGCAACGACGCAAAACAACGCAACCTGCATTC
Internal bar code:GGAGGGCCACACTGGATGCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4701
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTGGGTCCTCTTCGATCT
Suggested primer 2:GATCACTCTGATGGAGGGCG