Insertion junction: CLIP2.038032_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.038032
Chromosome:chromosome 1
Location:4965108
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g034451 (1 of 1) K14012 - UBX domain-containing protein 1 (SHP1, UBX1, NSFL1C) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGACCTTCCGACTGGTCCTGCCTGGAATCCCCCCCCCCGTCTACCACTTG
Internal bar code:GTGCTGTTAGTGCTCTTTTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:70
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGGGATAGCCGTTCATG
Suggested primer 2:CATGCGTGGAGTAGGGGAAG