Insertion junction: CLIP2.038034_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.038034
Chromosome:chromosome 3
Location:6600592
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g194700 AGL1 (1 of 1) 3.2.1.20//3.2.1.3 - Alpha-glucosidase / Maltase-glucoamylase // Glucan 1,4-alpha-glucosidase / Lysosomal alpha-glucosidase; Alpha glucosidase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGACTGCTGCGTGTGGCGGAGGTGGTGGTGGTGGGAGTGGTGCTGCCGCC
Internal bar code:CGATTGTTGTTTAACGAATGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:693
LEAP-Seq percent confirming:5.26316
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTCTGTGAAACTACGCCA
Suggested primer 2:CACTGGTCGAGGAGGATGTG