Insertion junction: CLIP2.038038_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038038
Chromosome:chromosome 3
Location:6712240
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g195900 (1 of 7) PTHR11584//PTHR11584:SF381 - SERINE/THREONINE PROTEIN KINASE // PROTEIN PQN-80, ISOFORM B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGGGAAGGGGAAGGGCGCGGGGCCGCCAGCACGTGACGCGCGCTGCTC
Internal bar code:TGCGTTTGGGTTCTTATGGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3640
LEAP-Seq percent confirming:98.4375
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:CAACAACATGAGCCGGCAAA
Suggested primer 2:AGCAGTGGGTGAATGGACAG