Insertion junction: CLIP2.038045_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.038045
Chromosome:chromosome 10
Location:2063207
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g432650 (1 of 1) 3.6.1.59 - 5'-(N(7)-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase / M(7)GpppX pyrophosphatase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATCTACCCGAACCACCCTAACCACCCCAACCATTCCAACTACCAGCCC
Internal bar code:ATAATTGTAATGTTTGGCGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:261
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGGTAGTAGGAGGGCTG
Suggested primer 2:GGGTAAGCATCAGCCCAAGT