Insertion junction: CLIP2.038046_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.038046
Chromosome:chromosome 3
Location:7668983
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g204050 ELG6 Exostosin-like glycosyltransferase 6; (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGTGTGTGTGTGTGTGTGTATACGTCAAGCACAACGCTGCACCAGCC
Internal bar code:CGTAGCAAAGGGAGCGGGGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3022
LEAP-Seq percent confirming:68.1818
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GATGGGCTGGTACGGAGATG
Suggested primer 2:CGAGAGTCTACGTGTACGGC