Insertion junction: CLIP2.038047_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.038047
Chromosome:chromosome 12
Location:2341830
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g508050 (1 of 1) PF01388//PF12047//PF15612 - ARID/BRIGHT DNA binding domain (ARID) // Cytosine specific DNA methyltransferase replication foci domain (DNMT1-RFD) // WSTF, HB1, Itc1p, MBD9 motif 1 (WHIM1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGGCAACATCGGCCGCGAGGCGCCGCTGCTCCGCGTGCTGGAGAGCAT
Internal bar code:TCTGGAATAGCAGGATGAGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:336
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GTAAGCCTTGCTGCACACAC
Suggested primer 2:GCGCATAACCTCCTCCTCTC