Insertion junction: CLIP2.038049_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.038049
Chromosome:chromosome 12
Location:5989925
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534200 (1 of 1) PTHR24365//PTHR24365:SF381 - TOLL-LIKE RECEPTOR // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCTTCTTGACACATGAGGTGCCAGGACGCAGGGGTAGGGGTGATGCGC
Internal bar code:TAAAGGGAAATTAGTCCGCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:376
LEAP-Seq percent confirming:45.4545
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGTAGATCGTTCGACCTG
Suggested primer 2:GCCAACAACACTCCTTGCTG