Insertion junction: CLIP2.038049_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038049
Chromosome:chromosome 12
Location:5989935
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534200 (1 of 1) PTHR24365//PTHR24365:SF381 - TOLL-LIKE RECEPTOR // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGAAGGCGAAAAAACACCGCACCAACCCGCACGCACGAGCATCCTCAC
Internal bar code:TAAAGGGAAATTAGTCCGCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3484
LEAP-Seq percent confirming:78.3784
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAACAACACTCCTTGCTG
Suggested primer 2:CCCGTAGATCGTTCGACCTG