Insertion junction: CLIP2.038051_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.038051
Chromosome:chromosome 14
Location:602427
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g611850 (1 of 1) K17087 - transmembrane 9 superfamily member 3 (TM9SF3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGAAAACAACAAAACGAAGCCCGCCCAGACGGCGCGACGGAGTTACTTA
Internal bar code:CCTGTACCATAAAGTATTGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:732
LEAP-Seq percent confirming:79.1667
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTCTACCCAATGCTGCA
Suggested primer 2:TCTTTCCTCAGTGTGCGCAT