Insertion junction: CLIP2.038052_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038052
Chromosome:chromosome 8
Location:3568076
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g379450 (1 of 1) K01190 - beta-galactosidase (lacZ) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCGGCAAGGCCCTGAGTGAGGAGCACATGGTGCGCGACATCCTGCTCA
Internal bar code:ACACTGAATCAAGCCTTTGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1873
LEAP-Seq percent confirming:96.9231
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTGCTCTCTGACACACAC
Suggested primer 2:AGGACCCGCACTTGTATGTG