Insertion junction: CLIP2.038053_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.038053
Chromosome:chromosome 17
Location:3706716
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g725950 CSR13 (1 of 3) K08106 - N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase (CHST15); Carbohydrate sulfotransferase-related 13 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTTTGTCCCGCCTCGACCGGCGTACCGTATGGCCCCAACACCAGTCCC
Internal bar code:AACACATAAGTGATCAACTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1868
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCATCTCTGCCTCTCCGA
Suggested primer 2:CCCAGCAGCCTCAAACAAAC