Insertion junction: CLIP2.038061_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.038061
Chromosome:chromosome 17
Location:1191183
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g704600 (1 of 1) PTHR21346:SF0 - PROTEIN T06D8.7 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCATTAAGGATAGAGACTGGCGGCGGGTGGGCGAGATGCAGCATGCG
Internal bar code:GTGCGAGGTGGATTTCGCCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1105
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GCACGGTTTATCGGAATGGC
Suggested primer 2:CCCAGACAAACCGAGCTCAT