Insertion junction: CLIP2.038066_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038066
Chromosome:chromosome 3
Location:6226961
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g191500 (1 of 2) PTHR11373:SF4 - DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE SAMHD1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTAAGGCTTGAGGCTGTGGATGGAGCGGGTTGGCGAAGGAGATTGGAG
Internal bar code:TAGGAACTTTGTTTTTAGTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:5900
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:TTACAGACGGGCACAAGCAT
Suggested primer 2:GGTCCAACGCACACAATGAC