Insertion junction: CLIP2.038067_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.038067
Chromosome:chromosome 12
Location:5997055
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534300 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCCCTAGTAAGCGGCGGAGCCTATCGCAATGCAATTGCTGGGTCCAAC
Internal bar code:CAGGTGTTGTATTTAGCATTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2044
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTGAGCAGCTCATCCAGA
Suggested primer 2:CTCAGCGGCACATTTGATGG