Insertion junction: CLIP2.038073_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.038073
Chromosome:plastome
Location:132515
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802319 2717001,ChreCp055,rps11 30S ribosomal protein S11; (1 of 1) IPR019981 - Ribosomal protein S11, bacterial-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTTTCACGAATAACACTTACTTTAATACCAGCTTTAAAAATCTCACGA
Internal bar code:AACGTGTTAGCGCGTCAGGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:75
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTCCAAAGCAAAGCACAA
Suggested primer 2:ATGGGTTACCTGGGACTCGA