Insertion junction: CLIP2.038081_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038081
Chromosome:chromosome 2
Location:5895540
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g117500 HXK1 Hexokinase; (1 of 1) K00844 - hexokinase (HK) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTCGACCTCCAGTTCCGCCAACCGCTCCGCGCTGGGGACGAGCTGGTC
Internal bar code:TTTTACGGTTAATTAATAACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1506
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTTATCCAACCCATTGCG
Suggested primer 2:CTATGTAGAGCCTGCAGCCC