Insertion junction: CLIP2.038084_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038084
Chromosome:chromosome 3
Location:2686572
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g160900 (1 of 1) PF07714//PF12796//PF13857 - Protein tyrosine kinase (Pkinase_Tyr) // Ankyrin repeats (3 copies) (Ank_2) // Ankyrin repeats (many copies) (Ank_5) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGATGAATTAGGAAGTTGAGTTGCGACCAGATGGGAGGATTGAGGAGA
Internal bar code:GCTCCAACGTGGTAAGGGCTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1347
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CACTCAGGGAAAAGCGAGGT
Suggested primer 2:AGACATGCCCGTTTCGTTCT