Insertion junction: CLIP2.038084_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038084
Chromosome:chromosome 3
Location:2686576
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g160900 (1 of 1) PF07714//PF12796//PF13857 - Protein tyrosine kinase (Pkinase_Tyr) // Ankyrin repeats (3 copies) (Ank_2) // Ankyrin repeats (many copies) (Ank_5) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACCCCCATCCCCTCCTCCCGCCGCCTCCCCCGCCTCCCAGGTGGCCAT
Internal bar code:CTGAGATTTATACGCTTCACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:413
LEAP-Seq percent confirming:21.4286
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AGACATGCCCGTTTCGTTCT
Suggested primer 2:CACTCAGGGAAAAGCGAGGT