Insertion junction: CLIP2.038100_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038100
Chromosome:chromosome 16
Location:2981017
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g663700 (1 of 1) K03871 - von Hippel-Lindau disease tumor supressor (VHL) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGAGACCAGGCTTGCCAGCTGCCGGAAGGGCAATGCTGCAGAGCTTAC
Internal bar code:GAGGGGCTAGGAGGCGTACATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1669
LEAP-Seq percent confirming:5.40541
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCGTAGAATATCCCGCCA
Suggested primer 2:GTGGACCGTTGACACGTTTG