Insertion junction: CLIP2.038101_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038101
Chromosome:chromosome 2
Location:7986713
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g145100 FAP39 Flagellar Associated Protein 39; (1 of 1) PF00122//PF00689//PF00690//PF00702//PF12710 - E1-E2 ATPase (E1-E2_ATPase) // Cation transporting ATPase, C-terminus (Cation_ATPase_C) // Cation transporter/ATPase, N-terminus (Cation_ATPase_N) // haloacid dehalogenase-like hydrolase (Hydrolase) // haloacid dehalogenase-like hydrolase (HAD) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTGTGTGGTCATCATTTTTGCATCCAGCCAGCCCGCTGCGATGCTCA
Internal bar code:TCTGTTTATTACAACGTGTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1888
LEAP-Seq percent confirming:78.2609
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TCATTTCCCCTGCTGGTGTC
Suggested primer 2:GGTATTACCGAGCTGTCCCG