Insertion junction: CLIP2.038103_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.038103
Chromosome:chromosome 3
Location:1321327
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g150400 PIGU1,PIGU,LRG5 GPI transamidase subunit PIG-U; (1 of 1) K05293 - phosphatidylinositol glycan, class U (PIGU) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCACACACCACACAGCCGCAGGCCCTGCAAGGGTCTCCCTGCCTGCCC
Internal bar code:TTTCAGTTGAAAAGGAGCGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:115
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AAAACACCACCCCCGAAACT
Suggested primer 2:TGACAGTTTACAGACGGGCC