Insertion junction: CLIP2.038107_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.038107
Chromosome:chromosome 12
Location:3309513
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g498850 CEP12 Cysteine endopeptidase; (1 of 3) 3.4.18.1 - Cathepsin X / Lysosomal carboxypeptidase B intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTGTCCCTTTGCTACCCGGTCGCTCCTCGCCCTCTCATCCCCTCCCCG
Internal bar code:TGTTGCCATACAGAGTTCCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1026
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TCTAGCCCCAAGAGCTGCTA
Suggested primer 2:CTGCCATCCTTGCAATACGC