Insertion junction: CLIP2.038109_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.038109
Chromosome:chromosome 1
Location:3538378
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g023000 PHT1,PHT4A,MFT12,PHT4-1 Sodium-dependent phosphate transporter, major facilitator superfamily; (1 of 3) PTHR11662:SF223 - SODIUM-DEPENDENT PHOSPHATE TRANSPORT PROTEIN 1, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTGCCCTACCCGCACACCGCCCTGCCACGCTCCCTCCCTCTTGCACTG
Internal bar code:CATCATATTGGCGTAGAATTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:154
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCCACCATACCCAAGAAT
Suggested primer 2:TACGGCTTCAGCTTTGGAGG