Insertion junction: CLIP2.038119_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.038119
Chromosome:chromosome 16
Location:4911399
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g686800 PTA2 (1 of 10) IPR005828//IPR020846 - Major facilitator, sugar transporter-like // Major facilitator superfamily domain; Proton/phosphate symporter, splice variant b intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGTACCCACTACCGCCTCACTTACCGCCCATGGCCTGAAGGGCCTCAC
Internal bar code:CGGATGCCCGACATGGGATGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:787
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CAGAGTCGTTCCAACACCGA
Suggested primer 2:CAGAGCCACAGAGCTGTTCA