Insertion junction: CLIP2.038122_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038122
Chromosome:chromosome 3
Location:7986297
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201950 (1 of 1) IPR003882//IPR008752//IPR024079 - Pistil-specific extensin-like protein // Peptidase M11, gametolysin // Metallopeptidase, catalytic domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGCAAACGCCCCCTTTCAGCAGGTTTGACTTAATAACCGCCATACCGT
Internal bar code:AGACGCGTAGAGCGAGTTGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1610
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:GAGATGTAAGGCCGAGGACG
Suggested primer 2:CCCACTGAGATGGACCCCTA