Insertion junction: CLIP2.038123_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038123
Chromosome:chromosome 16
Location:5431428
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g682600 (1 of 1) PTHR24079//PTHR24079:SF0 - FAMILY NOT NAMED // KNIRPS-RELATED PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTATAGAACACCAGAATCCACCTGCCTCCTAGCGCCCTAGCAACTCACC
Internal bar code:CAAGTTAGGCGACCCGGGCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2829
LEAP-Seq percent confirming:90.3846
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGCCTCACATGCTGTTG
Suggested primer 2:CTTCCTGCACACAAGCACAC