Insertion junction: CLIP2.038132_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.038132
Chromosome:chromosome 2
Location:7037984
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389838 (1 of 1) IPR000504//IPR002750//IPR012677 - RNA recognition motif domain // CobE/GbiG C-terminal domain // Nucleotide-binding alpha-beta plait domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGCAGGCTGGGCAACCTTGTTTCCAACGTGGACCGGGGAGCTTTAGAG
Internal bar code:AGGTAGGCAGGAGGTGTTTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:351
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ATAGCTGGATGCATGGCCTC
Suggested primer 2:CTGTTTGCCGGCATTGGAAA